Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015817661.1_cds_XP_016499285.1_13225
CDS Infomation

[gene=LOC107817903] [db_xref=GeneID:107817903] [protein=protein ROOT INITIATION DEFECTIVE 3-like] [protein_id=XP_016499285.1] [location=complement(join(61372..61536,62925..63172,64258..64385,65036..65235,65526..65673,65762..65895,65994..66107,66259..66471))] [gbkey=CDS]
Sequence

ATGACGGAGCTGGAATTGGTAATCGCGTCGTCGCCGACCGATGCCGGTATCGGCTGTTGG
GACCTCCATACTGGCGCCGAGCACCTTCGTTATCGGTCTTGCTCCTCCCCCTCCCACGGC
CTTGTCTGTGTCGGCGGCCGCTTTCTCGCCTCCTCTCAACTCTGTGCTACCAAATCGTCG
TCAGGCTCTATCCTTTACTGGTCCTGGAACAAGCCTCAAGTTGAAGTTAAAAGCTTTCCA
GCGGAATCTATAAGTCCACTTGTTTGCAACAATGAGGGAACTTATATGGCCGGAGGAGGT
GCATCCGGTGATATATACTTGTGGCAGGTTGCGACTGGTAAACTACTTAAGAAGTGGCAT
GCTCACTATAGGGCAGTTACTTGCTTGAAATTCAATGATGATCAATCACTTCTGATTTCT
GGTTCAGAGGATGGATCTGTTCGAGTTTGGTCTCTTATAATGGTATTTGATGATTTGTTG
AGGGAGAAAGCAAGACAGCCTTACGAGTATAGTTTCTCTGAGCATTCTTTGAAGGTGACT
GATGTTGTGACTGGGTATGGCGGAGCTAATGCAATTGTTGTATCTGCTTCAGAAGATAGA
ACATGCAAGGTATGGAGCTTGTCGAGAGGAAAATTGTTGAGAAACATTGTGTTTCCATCA
GTAATTGATGCTATTGCATTGGACCCTGGTGAAGATGTCTTCTATGCTGGTGGTAGAGAT
GGGAAAATATACATTGCTGCACTAAATGCTGTTGCTGACCCCAACAGTAATTACGGATTG
CATATTCTTGGTTTTTTGTCTGAGCAAAGTAAGGCTATTACGTGCTTAGCATTAACTACG
GACGGGGTCTTGCTAATTTCTGGATCAGAGGATGGCATGGTTCGGGTGTGGAACACTAAA
GACCATAACATCGCCCGAATTTTTAGGCATGCAAAAGGCCCAGTTAACAATATTGTTGTT
GTTAGACAACCATCTCTCCTGAGTCCCAGAGGATCTGTGAATTCCCAAGGGCCGTCCGTA
AAGAGACATGGGGTATCATTACCACCCCCATTGGAAAAGTATGCTAACTCAGCAGATGAT
AATGATTATGTGGCAGTAATTGGCCCCCGGGTCAATCCTGATAGATCTGTTGAAGCTTCA
TATATCAGTGTTCAGACACTAAATAATCAAATCTTAGAGCTTCAGAGACAAGGGTCTTCT
GCTGCTGCTCAAATGGAGATCGAAAAGCTAAAACTCGACCGCAGCAGGTCCATACAAATG
ATTCAGCAATGGGAAAAGAAGTATCAAAATCTACATGAGTTTTGTGTAACCGAGCTATTG
GATGGGGAACCAGCTGGAAATACTGCGTGA

Peptide Sequence

PEP ID

XP_016499285.1
PEP Infomation

PREDICTED: protein ROOT INITIATION DEFECTIVE 3-like [Nicotiana tabacum]
Sequence

MTELELVIASSPTDAGIGCWDLHTGAEHLRYRSCSSPSHGLVCVGGRFLASSQLCATKSS
SGSILYWSWNKPQVEVKSFPAESISPLVCNNEGTYMAGGGASGDIYLWQVATGKLLKKWH
AHYRAVTCLKFNDDQSLLISGSEDGSVRVWSLIMVFDDLLREKARQPYEYSFSEHSLKVT
DVVTGYGGANAIVVSASEDRTCKVWSLSRGKLLRNIVFPSVIDAIALDPGEDVFYAGGRD
GKIYIAALNAVADPNSNYGLHILGFLSEQSKAITCLALTTDGVLLISGSEDGMVRVWNTK
DHNIARIFRHAKGPVNNIVVVRQPSLLSPRGSVNSQGPSVKRHGVSLPPPLEKYANSADD
NDYVAVIGPRVNPDRSVEASYISVQTLNNQILELQRQGSSAAAQMEIEKLKLDRSRSIQM
IQQWEKKYQNLHEFCVTELLDGEPAGNTA

Transcript Sequence

Gene sequence data has not been registered.